WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T03F1.1 Sequence Name  T03F1.1
Length (nt)  1260   Chromosome Location  I: 3874371-3874810
Chromosome . Primary Identifier  I Chromosome Location . Start  3874371
Chromosome Location . End  3874810
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03F1.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE13096 UBA-5 46.5 419 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00052277
WBRNAi00004114
WBRNAi00076636
WBRNAi00035091
WBRNAi00107652
WBRNAi00116513

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T03F1.1 3874371 3874810 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020184 uba-5 T03F1.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:T03F1.1 3874371 3874810 1
CDS:T03F1.1 3874859 3875132 1
CDS:T03F1.1 3875182 3875727 1

1 Sequence

Length
1260

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T03F1.1.2 T03F1.1.2 1649   I: 3873444-3875997
Transcript:T03F1.1.3 T03F1.1.3 1633   I: 3873697-3875996
Transcript:T03F1.1.1 T03F1.1.1 1534   I: 3874365-3875995