WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R12E2.5 Sequence Name  R12E2.5
Length (nt)  1119   Chromosome Location  I: 4162057-4162136
Chromosome . Primary Identifier  I Chromosome Location . Start  4162057
Chromosome Location . End  4162136
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12E2.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28765 INX-16 43.1 372 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00051856
WBRNAi00073240
WBRNAi00004087
WBRNAi00069167
WBRNAi00034893
WBRNAi00026114
WBRNAi00060018
WBRNAi00060020
WBRNAi00060021
WBRNAi00060023
WBRNAi00060019
WBRNAi00060022
WBRNAi00060024
WBRNAi00060025
WBRNAi00060026
WBRNAi00026113

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R12E2.5 4162057 4162136 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002138 inx-16 R12E2.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:R12E2.5 4162057 4162136 1
CDS:R12E2.5 4162405 4162636 1
CDS:R12E2.5 4163084 4163680 1
CDS:R12E2.5 4164150 4164309 1
CDS:R12E2.5 4164369 4164418 1

1 Sequence

Length
1119

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R12E2.5.2 R12E2.5.2 1746   I: 4162035-4165023
Transcript:R12E2.5.1 R12E2.5.1 1453   I: 4162046-4165025