WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11D9.1.1 Sequence Name  C11D9.1.1
Length (nt)  2937   Chromosome Location  I: 4409689-4426188
Chromosome . Primary Identifier  I Chromosome Location . Start  4409689
Chromosome Location . End  4426188 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11D9.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015704 tiam-1 C11D9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11D9.1 C11D9.1 2670   I: 4411802-4411869

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C11D9.1.1 4409689 4426188 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9775   88   I: 4409689-4409776 Caenorhabditis elegans
Exon9778   114   I: 4411756-4411869 Caenorhabditis elegans
Exon9785   73   I: 4414296-4414368 Caenorhabditis elegans
Exon9786   94   I: 4415221-4415314 Caenorhabditis elegans
Exon9787   110   I: 4416171-4416280 Caenorhabditis elegans
Exon9788   120   I: 4417073-4417192 Caenorhabditis elegans
Exon9789   63   I: 4417239-4417301 Caenorhabditis elegans
Exon9790   345   I: 4418247-4418591 Caenorhabditis elegans
Exon9791   104   I: 4422032-4422135 Caenorhabditis elegans
Exon9792   202   I: 4422686-4422887 Caenorhabditis elegans
Exon9793   210   I: 4422956-4423165 Caenorhabditis elegans
Exon9794   168   I: 4423830-4423997 Caenorhabditis elegans
Exon9795   117   I: 4424044-4424160 Caenorhabditis elegans
Exon9796   150   I: 4424208-4424357 Caenorhabditis elegans
Exon9797   402   I: 4424818-4425219 Caenorhabditis elegans
Exon9798   138   I: 4425501-4425638 Caenorhabditis elegans
Exon9799   121   I: 4425693-4425813 Caenorhabditis elegans
Exon9800   318   I: 4425871-4426188 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C11D9.1.1 4409689 4426188 1

1 Sequence

Length
2937

1 Sequence Ontology Term

Identifier Name Description
transcript