WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y110A7A.16 Sequence Name  Y110A7A.16
Length (nt)  3636   Chromosome Location  I: 5114199-5114303
Chromosome . Primary Identifier  I Chromosome Location . Start  5114199
Chromosome Location . End  5114303
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A7A.16

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53984 ELPC-1 137.9 1211 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00055317
WBRNAi00004522
WBRNAi00116468

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y110A7A.16 5114199 5114303 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022463 elpc-1 Y110A7A.16 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y110A7A.16 5114199 5114303 -1
CDS:Y110A7A.16 5114559 5114728 -1
CDS:Y110A7A.16 5114778 5115863 -1
CDS:Y110A7A.16 5116013 5116658 -1
CDS:Y110A7A.16 5116745 5117088 -1
CDS:Y110A7A.16 5117262 5117609 -1
CDS:Y110A7A.16 5117656 5117944 -1
CDS:Y110A7A.16 5117995 5118229 -1
CDS:Y110A7A.16 5118281 5118492 -1
CDS:Y110A7A.16 5118551 5118610 -1
CDS:Y110A7A.16 5118660 5118745 -1
CDS:Y110A7A.16 5118793 5118847 -1

1 Sequence

Length
3636

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y110A7A.16.1 Y110A7A.16.1 3718   I: 5114122-5118852