WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y110A7A.17b.1 Sequence Name  Y110A7A.17b.1
Length (nt)  2664   Chromosome Location  I: 5123915-5127201
Chromosome . Primary Identifier  I Chromosome Location . Start  5123915
Chromosome Location . End  5127201 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A7A.17b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003132 mat-1 Y110A7A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A7A.17b Y110A7A.17b 2373   I: 5124192-5124346

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.17b.1 5123915 5127201 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11792   432   I: 5123915-5124346 Caenorhabditis elegans
Exon11795   356   I: 5124397-5124752 Caenorhabditis elegans
Exon11797   499   I: 5124801-5125299 Caenorhabditis elegans
Exon11799   142   I: 5125347-5125488 Caenorhabditis elegans
Exon11801   156   I: 5125532-5125687 Caenorhabditis elegans
Exon11803   100   I: 5125733-5125832 Caenorhabditis elegans
Exon11805   208   I: 5125876-5126083 Caenorhabditis elegans
Exon11807   176   I: 5126279-5126454 Caenorhabditis elegans
Exon11809   261   I: 5126506-5126766 Caenorhabditis elegans
Exon11811   148   I: 5126819-5126966 Caenorhabditis elegans
Exon11813   186   I: 5127016-5127201 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y110A7A.17b.1 5123915 5127201 -1

1 Sequence

Length
2664

1 Sequence Ontology Term

Identifier Name Description
transcript