WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y110A7A.17b Sequence Name  Y110A7A.17b
Length (nt)  2373   Chromosome Location  I: 5124192-5124346
Chromosome . Primary Identifier  I Chromosome Location . Start  5124192
Chromosome Location . End  5124346
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A7A.17b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53900 MAT-1, isoform b 88.7 790 Caenorhabditis elegans
 

Other

24 RNAi

WormBase ID
WBRNAi00072710
WBRNAi00074929
WBRNAi00074928
WBRNAi00074931
WBRNAi00074930
WBRNAi00074933
WBRNAi00074932
WBRNAi00074934
WBRNAi00074927
WBRNAi00072712
WBRNAi00103778
WBRNAi00078197
WBRNAi00055318
WBRNAi00070972
WBRNAi00036553
WBRNAi00000116
WBRNAi00072711
WBRNAi00081291
WBRNAi00087517
WBRNAi00026576
WBRNAi00087516
WBRNAi00026577
WBRNAi00116766
WBRNAi00075808

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y110A7A.17b 5124192 5124346 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003132 mat-1 Y110A7A.17 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y110A7A.17b 5124192 5124346 -1
CDS:Y110A7A.17b 5124397 5124752 -1
CDS:Y110A7A.17b 5124801 5125299 -1
CDS:Y110A7A.17b 5125347 5125488 -1
CDS:Y110A7A.17b 5125532 5125687 -1
CDS:Y110A7A.17b 5125733 5125832 -1
CDS:Y110A7A.17b 5125876 5126083 -1
CDS:Y110A7A.17b 5126279 5126454 -1
CDS:Y110A7A.17b 5126506 5126766 -1
CDS:Y110A7A.17b 5126819 5126966 -1
CDS:Y110A7A.17b 5127016 5127187 -1

1 Sequence

Length
2373

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y110A7A.17b.1 Y110A7A.17b.1 2664   I: 5123915-5127201