WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A12.8.1 Sequence Name  F55A12.8.1
Length (nt)  3274   Chromosome Location  I: 5349646-5353774
Chromosome . Primary Identifier  I Chromosome Location . Start  5349646
Chromosome Location . End  5353774 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A12.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018866 nath-10 F55A12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A12.8 F55A12.8 3132   I: 5349781-5349874

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55A12.8.1 5349646 5353774 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12445   229   I: 5349646-5349874 Caenorhabditis elegans
Exon12446   276   I: 5349923-5350198 Caenorhabditis elegans
Exon12447   176   I: 5350538-5350713 Caenorhabditis elegans
Exon12448   311   I: 5350762-5351072 Caenorhabditis elegans
Exon12449   262   I: 5351159-5351420 Caenorhabditis elegans
Exon12450   396   I: 5351472-5351867 Caenorhabditis elegans
Exon12451   213   I: 5351913-5352125 Caenorhabditis elegans
Exon12452   200   I: 5352173-5352372 Caenorhabditis elegans
Exon12453   103   I: 5352421-5352523 Caenorhabditis elegans
Exon12454   432   I: 5352573-5353004 Caenorhabditis elegans
Exon12455   300   I: 5353051-5353350 Caenorhabditis elegans
Exon12456   376   I: 5353399-5353774 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55A12.8.1 5349646 5353774 -1

1 Sequence

Length
3274

1 Sequence Ontology Term

Identifier Name Description
transcript