WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55A12.8 Sequence Name  F55A12.8
Length (nt)  3132   Chromosome Location  I: 5349781-5349874
Chromosome . Primary Identifier  I Chromosome Location . Start  5349781
Chromosome Location . End  5349874
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A12.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11131 NATH-10 117.0 1043 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00048423
WBRNAi00003778
WBRNAi00082408
WBRNAi00032841
WBRNAi00099807
WBRNAi00082685
WBRNAi00100426
WBRNAi00025655
WBRNAi00061478
WBRNAi00076479
WBRNAi00100800
WBRNAi00099201
WBRNAi00099605
WBRNAi00099403
WBRNAi00025656
WBRNAi00117177
WBRNAi00106868
WBRNAi00100052
WBRNAi00100239
WBRNAi00106257
WBRNAi00106713
WBRNAi00100987
WBRNAi00100613

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55A12.8 5349781 5349874 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018866 nath-10 F55A12.8 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55A12.8 5349781 5349874 -1
CDS:F55A12.8 5349923 5350198 -1
CDS:F55A12.8 5350538 5350713 -1
CDS:F55A12.8 5350762 5351072 -1
CDS:F55A12.8 5351159 5351420 -1
CDS:F55A12.8 5351472 5351867 -1
CDS:F55A12.8 5351913 5352125 -1
CDS:F55A12.8 5352173 5352372 -1
CDS:F55A12.8 5352421 5352523 -1
CDS:F55A12.8 5352573 5353004 -1
CDS:F55A12.8 5353051 5353350 -1
CDS:F55A12.8 5353399 5353767 -1

1 Sequence

Length
3132

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55A12.8.1 F55A12.8.1 3274   I: 5349646-5353774