WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A12.3.2 Sequence Name  F55A12.3.2
Length (nt)  2550   Chromosome Location  I: 5358512-5365174
Chromosome . Primary Identifier  I Chromosome Location . Start  5358512
Chromosome Location . End  5365174 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A12.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004087 ppk-1 F55A12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A12.3 F55A12.3 1836   I: 5358525-5358579

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55A12.3.2 5358512 5365174 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon12483   68   I: 5358512-5358579 Caenorhabditis elegans
Exon12487   41   I: 5358629-5358669 Caenorhabditis elegans
Exon12490   205   I: 5358718-5358922 Caenorhabditis elegans
Exon12493   76   I: 5358975-5359050 Caenorhabditis elegans
Exon12496   118   I: 5359097-5359214 Caenorhabditis elegans
Exon12499   153   I: 5359268-5359420 Caenorhabditis elegans
Exon12502   565   I: 5359807-5360371 Caenorhabditis elegans
Exon12505   77   I: 5360427-5360503 Caenorhabditis elegans
Exon12508   85   I: 5360713-5360797 Caenorhabditis elegans
Exon12511   255   I: 5363016-5363270 Caenorhabditis elegans
Exon12514   104   I: 5363890-5363993 Caenorhabditis elegans
Exon12517   299   I: 5364046-5364344 Caenorhabditis elegans
Exon12520   504   I: 5364671-5365174 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55A12.3.2 5358512 5365174 1

1 Sequence

Length
2550

1 Sequence Ontology Term

Identifier Name Description
transcript