WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:F55A12.3 Sequence Name  F55A12.3
Length (nt)  1836   Chromosome Location  I: 5358525-5358579
Chromosome . Primary Identifier  I Chromosome Location . Start  5358525
Chromosome Location . End  5358579
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

0 Synonyms

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30541 PPK-1 68.6 611 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00062783
WBRNAi00109211
WBRNAi00025652
WBRNAi00116143
WBRNAi00085484
WBRNAi00032837
WBRNAi00025651
WBRNAi00048418
WBRNAi00003773
WBRNAi00109599
WBRNAi00088551
WBRNAi00117168
WBRNAi00109308
WBRNAi00062784
WBRNAi00109502
WBRNAi00109405
WBRNAi00094947

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004087 ppk-1 F55A12.3 Caenorhabditis elegans

0 Locations

1 Sequence

Length
1836

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55A12.3.3 F55A12.3.3 2834   I: 5358512-5365132
Transcript:F55A12.3.2 F55A12.3.2 2550   I: 5358512-5365174
Transcript:F55A12.3.1 F55A12.3.1 2403   I: 5358522-5365173