WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F27C1.11a Sequence Name  F27C1.11a
Length (nt)  3807   Chromosome Location  I: 5434091-5434181
Chromosome . Primary Identifier  I Chromosome Location . Start  5434091
Chromosome Location . End  5434181
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27C1.11a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53755 F27C1.11, isoform a 143.0 1268 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00003502
WBRNAi00045719
WBRNAi00045720
WBRNAi00045721
WBRNAi00003495
WBRNAi00003496

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F27C1.11a 5434091 5434181 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017858 F27C1.11 F27C1.11 Caenorhabditis elegans

28 Locations


Feature . Primary Identifier
Start End Strand
CDS:F27C1.11a 5434091 5434181 -1
CDS:F27C1.11a 5434233 5434300 -1
CDS:F27C1.11a 5434344 5434421 -1
CDS:F27C1.11a 5435812 5435945 -1
CDS:F27C1.11a 5436136 5436253 -1
CDS:F27C1.11a 5436363 5436449 -1
CDS:F27C1.11a 5436492 5436626 -1
CDS:F27C1.11a 5436674 5436765 -1
CDS:F27C1.11a 5436815 5436944 -1
CDS:F27C1.11a 5437468 5437568 -1
CDS:F27C1.11a 5437618 5437696 -1
CDS:F27C1.11a 5437747 5437916 -1
CDS:F27C1.11a 5438098 5438198 -1
CDS:F27C1.11a 5438252 5438459 -1
CDS:F27C1.11a 5438506 5438586 -1
CDS:F27C1.11a 5438952 5439161 -1
CDS:F27C1.11a 5439209 5439332 -1
CDS:F27C1.11a 5439637 5439755 -1
CDS:F27C1.11a 5439813 5440005 -1
CDS:F27C1.11a 5440049 5440414 -1
CDS:F27C1.11a 5440478 5440713 -1
CDS:F27C1.11a 5440906 5441033 -1
CDS:F27C1.11a 5441082 5441381 -1
CDS:F27C1.11a 5441635 5441707 -1
CDS:F27C1.11a 5441769 5441883 -1
CDS:F27C1.11a 5442099 5442179 -1
CDS:F27C1.11a 5442312 5442419 -1
CDS:F27C1.11a 5442946 5443026 -1

1 Sequence

Length
3807

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F27C1.11a.1 F27C1.11a.1 3992   I: 5433906-5443026