WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C09D4.1a Sequence Name  C09D4.1a
Length (nt)  1761   Chromosome Location  I: 5497917-5497961
Chromosome . Primary Identifier  I Chromosome Location . Start  5497917
Chromosome Location . End  5497961
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D4.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27671 C09D4.1, isoform a 63.8 586 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00066039
WBRNAi00000802
WBRNAi00040177
WBRNAi00002919
WBRNAi00084987
WBRNAi00028717

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C09D4.1a 5497917 5497961 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015632 C09D4.1 C09D4.1 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:C09D4.1a 5497917 5497961 1
CDS:C09D4.1a 5498850 5498996 1
CDS:C09D4.1a 5499170 5499382 1
CDS:C09D4.1a 5499886 5500034 1
CDS:C09D4.1a 5500085 5500153 1
CDS:C09D4.1a 5501530 5501627 1
CDS:C09D4.1a 5501673 5501957 1
CDS:C09D4.1a 5502014 5502154 1
CDS:C09D4.1a 5503058 5503128 1
CDS:C09D4.1a 5503182 5503393 1
CDS:C09D4.1a 5503504 5503609 1
CDS:C09D4.1a 5504253 5504364 1
CDS:C09D4.1a 5504920 5504978 1
CDS:C09D4.1a 5505029 5505082 1

1 Sequence

Length
1761

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C09D4.1a.1 C09D4.1a.1 2377   I: 5497679-5505460