WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C09D4.1b Sequence Name  C09D4.1b
Length (nt)  1428   Chromosome Location  I: 5499311-5499382
Chromosome . Primary Identifier  I Chromosome Location . Start  5499311
Chromosome Location . End  5499382
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D4.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37705 C09D4.1, isoform b 52.0 475 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00066039
WBRNAi00000802
WBRNAi00040177
WBRNAi00002919
WBRNAi00084987
WBRNAi00028717

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C09D4.1b 5499311 5499382 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015632 C09D4.1 C09D4.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C09D4.1b 5499311 5499382 1
CDS:C09D4.1b 5499886 5500034 1
CDS:C09D4.1b 5500085 5500153 1
CDS:C09D4.1b 5501530 5501627 1
CDS:C09D4.1b 5501673 5501957 1
CDS:C09D4.1b 5502014 5502154 1
CDS:C09D4.1b 5503058 5503128 1
CDS:C09D4.1b 5503182 5503393 1
CDS:C09D4.1b 5503504 5503609 1
CDS:C09D4.1b 5504253 5504364 1
CDS:C09D4.1b 5504920 5504978 1
CDS:C09D4.1b 5505029 5505082 1

1 Sequence

Length
1428

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C09D4.1b.2 C09D4.1b.2 1877   I: 5498453-5505140
Transcript:C09D4.1b.1 C09D4.1b.1 2030   I: 5498850-5505396
Transcript:C09D4.1b.3 C09D4.1b.3 2039   I: 5499065-5505447