WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01A10.2b.1 Sequence Name  M01A10.2b.1
Length (nt)  939   Chromosome Location  I: 5560141-5561642
Chromosome . Primary Identifier  I Chromosome Location . Start  5560141
Chromosome Location . End  5561642 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01A10.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006594 tom-1 M01A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01A10.2b M01A10.2b 582   I: 5560158-5560216

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01A10.2b.1 5560141 5561642 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13324   76   I: 5560141-5560216 Caenorhabditis elegans
Exon13326   64   I: 5560310-5560373 Caenorhabditis elegans
Exon13333   114   I: 5560525-5560638 Caenorhabditis elegans
Exon13340   61   I: 5560827-5560887 Caenorhabditis elegans
Exon13347   146   I: 5560934-5561079 Caenorhabditis elegans
Exon13357   478   I: 5561165-5561642 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01A10.2b.1 5560141 5561642 1

1 Sequence

Length
939

1 Sequence Ontology Term

Identifier Name Description
transcript