WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M01A10.2b Sequence Name  M01A10.2b
Length (nt)  582   Chromosome Location  I: 5560158-5560216
Chromosome . Primary Identifier  I Chromosome Location . Start  5560158
Chromosome Location . End  5560216
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01A10.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41684 TOM-1, isoform b 21.0 193 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00034331

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M01A10.2b 5560158 5560216 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006594 tom-1 M01A10.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:M01A10.2b 5560158 5560216 1
CDS:M01A10.2b 5560310 5560373 1
CDS:M01A10.2b 5560525 5560638 1
CDS:M01A10.2b 5560827 5560887 1
CDS:M01A10.2b 5560934 5561079 1
CDS:M01A10.2b 5561165 5561302 1

1 Sequence

Length
582

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M01A10.2b.1 M01A10.2b.1 939   I: 5560141-5561642