WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01E11.7c.2 Sequence Name  M01E11.7c.2
Length (nt)  4296   Chromosome Location  I: 5583408-5603500
Chromosome . Primary Identifier  I Chromosome Location . Start  5583408
Chromosome Location . End  5603500 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E11.7c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006508 tns-1 M01E11.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01E11.7c M01E11.7c 2850   I: 5583731-5583926

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.7c.2 5583408 5603500 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13424   519   I: 5583408-5583926 Caenorhabditis elegans
Exon13432   110   I: 5583981-5584090 Caenorhabditis elegans
Exon13441   134   I: 5584484-5584617 Caenorhabditis elegans
Exon13450   148   I: 5584663-5584810 Caenorhabditis elegans
Exon13459   80   I: 5585998-5586077 Caenorhabditis elegans
Exon13469   120   I: 5586137-5586256 Caenorhabditis elegans
Exon13478   87   I: 5587842-5587928 Caenorhabditis elegans
Exon13489   68   I: 5591551-5591618 Caenorhabditis elegans
Exon13498   164   I: 5591677-5591840 Caenorhabditis elegans
Exon13505   240   I: 5592871-5593110 Caenorhabditis elegans
Exon13512   193   I: 5593310-5593502 Caenorhabditis elegans
Exon13520   197   I: 5593584-5593780 Caenorhabditis elegans
Exon13526   316   I: 5595571-5595886 Caenorhabditis elegans
Exon13532   150   I: 5595939-5596088 Caenorhabditis elegans
Exon13538   531   I: 5596395-5596925 Caenorhabditis elegans
Exon13544   226   I: 5597135-5597360 Caenorhabditis elegans
Exon13549   144   I: 5600674-5600817 Caenorhabditis elegans
Exon13553   131   I: 5600867-5600997 Caenorhabditis elegans
Exon13557   90   I: 5601808-5601897 Caenorhabditis elegans
Exon13560   156   I: 5602034-5602189 Caenorhabditis elegans
Exon13563   84   I: 5602232-5602315 Caenorhabditis elegans
Exon13566   236   I: 5602370-5602605 Caenorhabditis elegans
Exon13569   98   I: 5603283-5603380 Caenorhabditis elegans
Exon13573   74   I: 5603427-5603500 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.7c.2 5583408 5603500 -1

1 Sequence

Length
4296

1 Sequence Ontology Term

Identifier Name Description
transcript