WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M01E11.7c Sequence Name  M01E11.7c
Length (nt)  2850   Chromosome Location  I: 5583731-5583926
Chromosome . Primary Identifier  I Chromosome Location . Start  5583731
Chromosome Location . End  5583926
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E11.7c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28613 TNS-1, isoform c 105.5 949 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00034355
WBRNAi00050758
WBRNAi00004009
WBRNAi00109627
WBRNAi00109239
WBRNAi00109336
WBRNAi00109530
WBRNAi00109433

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M01E11.7c 5583731 5583926 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006508 tns-1 M01E11.7 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:M01E11.7c 5583731 5583926 -1
CDS:M01E11.7c 5583981 5584090 -1
CDS:M01E11.7c 5584484 5584617 -1
CDS:M01E11.7c 5584663 5584810 -1
CDS:M01E11.7c 5585998 5586077 -1
CDS:M01E11.7c 5586137 5586256 -1
CDS:M01E11.7c 5587842 5587928 -1
CDS:M01E11.7c 5591551 5591618 -1
CDS:M01E11.7c 5591677 5591840 -1
CDS:M01E11.7c 5592871 5593110 -1
CDS:M01E11.7c 5593310 5593502 -1
CDS:M01E11.7c 5593584 5593780 -1
CDS:M01E11.7c 5595571 5595886 -1
CDS:M01E11.7c 5595939 5596088 -1
CDS:M01E11.7c 5596395 5596925 -1
CDS:M01E11.7c 5597135 5597250 -1

1 Sequence

Length
2850

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M01E11.7c.3 M01E11.7c.3 3561   I: 5583407-5600999
Transcript:M01E11.7c.1 M01E11.7c.1 3284   I: 5583407-5597360
Transcript:M01E11.7c.2 M01E11.7c.2 4296   I: 5583408-5603500