WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01E11.7e.1 Sequence Name  M01E11.7e.1
Length (nt)  3954   Chromosome Location  I: 5583731-5603481
Chromosome . Primary Identifier  I Chromosome Location . Start  5583731
Chromosome Location . End  5603481 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01E11.7e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006508 tns-1 M01E11.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01E11.7e M01E11.7e 3954   I: 5583731-5583926

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.7e.1 5583731 5603481 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13428   196   I: 5583731-5583926 Caenorhabditis elegans
Exon13434   110   I: 5583981-5584090 Caenorhabditis elegans
Exon13443   134   I: 5584484-5584617 Caenorhabditis elegans
Exon13452   148   I: 5584663-5584810 Caenorhabditis elegans
Exon13461   80   I: 5585998-5586077 Caenorhabditis elegans
Exon13471   120   I: 5586137-5586256 Caenorhabditis elegans
Exon13480   87   I: 5587842-5587928 Caenorhabditis elegans
Exon13492   68   I: 5591551-5591618 Caenorhabditis elegans
Exon13501   164   I: 5591677-5591840 Caenorhabditis elegans
Exon13508   240   I: 5592871-5593110 Caenorhabditis elegans
Exon13515   193   I: 5593310-5593502 Caenorhabditis elegans
Exon13523   197   I: 5593584-5593780 Caenorhabditis elegans
Exon13529   316   I: 5595571-5595886 Caenorhabditis elegans
Exon13535   150   I: 5595939-5596088 Caenorhabditis elegans
Exon13541   531   I: 5596395-5596925 Caenorhabditis elegans
Exon13546   226   I: 5597135-5597360 Caenorhabditis elegans
Exon13551   144   I: 5600674-5600817 Caenorhabditis elegans
Exon13554   131   I: 5600867-5600997 Caenorhabditis elegans
Exon13558   90   I: 5601808-5601897 Caenorhabditis elegans
Exon13561   156   I: 5602034-5602189 Caenorhabditis elegans
Exon13564   84   I: 5602232-5602315 Caenorhabditis elegans
Exon13567   236   I: 5602370-5602605 Caenorhabditis elegans
Exon13570   98   I: 5603283-5603380 Caenorhabditis elegans
Exon13571   55   I: 5603427-5603481 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01E11.7e.1 5583731 5603481 -1

1 Sequence

Length
3954

1 Sequence Ontology Term

Identifier Name Description
transcript