WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F46F11.1a Sequence Name  F46F11.1a
Length (nt)  3972   Chromosome Location  I: 5627826-5627873
Chromosome . Primary Identifier  I Chromosome Location . Start  5627826
Chromosome Location . End  5627873
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F11.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41904 F46F11.1, isoform a 150.1 1323 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00001789
WBRNAi00002342
WBRNAi00047530
WBRNAi00003683
WBRNAi00032365
WBRNAi00080599
WBRNAi00081150
WBRNAi00116492

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F46F11.1a 5627826 5627873 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018508 F46F11.1 F46F11.1 Caenorhabditis elegans

23 Locations


Feature . Primary Identifier
Start End Strand
CDS:F46F11.1a 5627826 5627873 1
CDS:F46F11.1a 5627921 5628007 1
CDS:F46F11.1a 5628066 5628182 1
CDS:F46F11.1a 5628227 5628292 1
CDS:F46F11.1a 5628340 5628588 1
CDS:F46F11.1a 5629908 5630273 1
CDS:F46F11.1a 5630512 5630865 1
CDS:F46F11.1a 5631131 5631264 1
CDS:F46F11.1a 5631646 5631791 1
CDS:F46F11.1a 5631991 5632232 1
CDS:F46F11.1a 5632279 5632695 1
CDS:F46F11.1a 5632759 5633115 1
CDS:F46F11.1a 5633519 5633736 1
CDS:F46F11.1a 5633791 5633863 1
CDS:F46F11.1a 5633912 5634057 1
CDS:F46F11.1a 5634126 5634235 1
CDS:F46F11.1a 5634403 5634467 1
CDS:F46F11.1a 5634535 5634594 1
CDS:F46F11.1a 5635180 5635399 1
CDS:F46F11.1a 5636717 5636770 1
CDS:F46F11.1a 5636867 5636968 1
CDS:F46F11.1a 5637018 5637119 1
CDS:F46F11.1a 5637258 5637496 1

1 Sequence

Length
3972

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F46F11.1a.1 F46F11.1a.1 4104   I: 5627819-5637621