WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55F8.1.2 Sequence Name  F55F8.1.2
Length (nt)  2946   Chromosome Location  I: 5662143-5667160
Chromosome . Primary Identifier  I Chromosome Location . Start  5662143
Chromosome Location . End  5667160 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55F8.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004224 ptr-10 F55F8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55F8.1 F55F8.1 2703   I: 5662286-5662483

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55F8.1.2 5662143 5667160 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13740   44   I: 5662143-5662186 Caenorhabditis elegans
Exon13741   200   I: 5662284-5662483 Caenorhabditis elegans
Exon13744   90   I: 5662656-5662745 Caenorhabditis elegans
Exon13746   96   I: 5662793-5662888 Caenorhabditis elegans
Exon13748   152   I: 5662943-5663094 Caenorhabditis elegans
Exon13750   154   I: 5663235-5663388 Caenorhabditis elegans
Exon13752   119   I: 5663588-5663706 Caenorhabditis elegans
Exon13754   116   I: 5663757-5663872 Caenorhabditis elegans
Exon13756   237   I: 5663917-5664153 Caenorhabditis elegans
Exon13758   370   I: 5664287-5664656 Caenorhabditis elegans
Exon13760   265   I: 5665110-5665374 Caenorhabditis elegans
Exon13762   111   I: 5665419-5665529 Caenorhabditis elegans
Exon13764   273   I: 5665586-5665858 Caenorhabditis elegans
Exon13766   304   I: 5666088-5666391 Caenorhabditis elegans
Exon13768   150   I: 5666689-5666838 Caenorhabditis elegans
Exon13770   265   I: 5666896-5667160 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55F8.1.2 5662143 5667160 1

1 Sequence

Length
2946

1 Sequence Ontology Term

Identifier Name Description
transcript