WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55F8.1.1 Sequence Name  F55F8.1.1
Length (nt)  2810   Chromosome Location  I: 5662284-5667068
Chromosome . Primary Identifier  I Chromosome Location . Start  5662284
Chromosome Location . End  5667068 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55F8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004224 ptr-10 F55F8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55F8.1 F55F8.1 2703   I: 5662286-5662483

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55F8.1.1 5662284 5667068 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon13742   200   I: 5662284-5662483 Caenorhabditis elegans
Exon13743   90   I: 5662656-5662745 Caenorhabditis elegans
Exon13745   96   I: 5662793-5662888 Caenorhabditis elegans
Exon13747   152   I: 5662943-5663094 Caenorhabditis elegans
Exon13749   154   I: 5663235-5663388 Caenorhabditis elegans
Exon13751   119   I: 5663588-5663706 Caenorhabditis elegans
Exon13753   116   I: 5663757-5663872 Caenorhabditis elegans
Exon13755   237   I: 5663917-5664153 Caenorhabditis elegans
Exon13757   370   I: 5664287-5664656 Caenorhabditis elegans
Exon13759   265   I: 5665110-5665374 Caenorhabditis elegans
Exon13761   111   I: 5665419-5665529 Caenorhabditis elegans
Exon13763   273   I: 5665586-5665858 Caenorhabditis elegans
Exon13765   304   I: 5666088-5666391 Caenorhabditis elegans
Exon13767   150   I: 5666689-5666838 Caenorhabditis elegans
Exon13769   173   I: 5666896-5667068 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55F8.1.1 5662284 5667068 1

1 Sequence

Length
2810

1 Sequence Ontology Term

Identifier Name Description
transcript