WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T19B4.1 Sequence Name  T19B4.1
Length (nt)  1992   Chromosome Location  I: 5702158-5702295
Chromosome . Primary Identifier  I Chromosome Location . Start  5702158
Chromosome Location . End  5702295
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19B4.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39282 PAMN-1 74.1 663 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00039620
WBRNAi00039621
WBRNAi00002899
WBRNAi00004226
WBRNAi00028435
WBRNAi00035652
WBRNAi00060401
WBRNAi00060400
WBRNAi00060402
WBRNAi00060403
WBRNAi00116505

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T19B4.1 5702158 5702295 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020556 pamn-1 T19B4.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:T19B4.1 5702158 5702295 1
CDS:T19B4.1 5702773 5702821 1
CDS:T19B4.1 5703120 5703272 1
CDS:T19B4.1 5703316 5703542 1
CDS:T19B4.1 5703587 5703843 1
CDS:T19B4.1 5703969 5704295 1
CDS:T19B4.1 5704341 5704633 1
CDS:T19B4.1 5704686 5704774 1
CDS:T19B4.1 5704849 5705006 1
CDS:T19B4.1 5705122 5705188 1
CDS:T19B4.1 5705240 5705452 1
CDS:T19B4.1 5705533 5705553 1

1 Sequence

Length
1992

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T19B4.1.1 T19B4.1.1 1994   I: 5702156-5705553