WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0414.8a.1 Sequence Name  B0414.8a.1
Length (nt)  2284   Chromosome Location  I: 5803956-5807291
Chromosome . Primary Identifier  I Chromosome Location . Start  5803956
Chromosome Location . End  5807291 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0414.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015176 vps-51 B0414.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0414.8a B0414.8a 2103   I: 5804087-5804239

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0414.8a.1 5803956 5807291 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14060   284   I: 5803956-5804239 Caenorhabditis elegans
Exon14061   159   I: 5804640-5804798 Caenorhabditis elegans
Exon14062   82   I: 5804845-5804926 Caenorhabditis elegans
Exon14064   99   I: 5805143-5805241 Caenorhabditis elegans
Exon14066   298   I: 5805295-5805592 Caenorhabditis elegans
Exon14068   154   I: 5805659-5805812 Caenorhabditis elegans
Exon14070   330   I: 5805883-5806212 Caenorhabditis elegans
Exon14072   432   I: 5806261-5806692 Caenorhabditis elegans
Exon14074   162   I: 5806752-5806913 Caenorhabditis elegans
Exon14076   175   I: 5806965-5807139 Caenorhabditis elegans
Exon14079   109   I: 5807183-5807291 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0414.8a.1 5803956 5807291 -1

1 Sequence

Length
2284

1 Sequence Ontology Term

Identifier Name Description
transcript