WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0414.8a Sequence Name  B0414.8a
Length (nt)  2103   Chromosome Location  I: 5804087-5804239
Chromosome . Primary Identifier  I Chromosome Location . Start  5804087
Chromosome Location . End  5804239
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0414.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30413 VPS-51, isoform a 78.8 700 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00039043
WBRNAi00002858
WBRNAi00076054
WBRNAi00028135
WBRNAi00117031
WBRNAi00062092
WBRNAi00085078

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0414.8a 5804087 5804239 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015176 vps-51 B0414.8 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0414.8a 5804087 5804239 -1
CDS:B0414.8a 5804640 5804798 -1
CDS:B0414.8a 5804845 5804926 -1
CDS:B0414.8a 5805143 5805241 -1
CDS:B0414.8a 5805295 5805592 -1
CDS:B0414.8a 5805659 5805812 -1
CDS:B0414.8a 5805883 5806212 -1
CDS:B0414.8a 5806261 5806692 -1
CDS:B0414.8a 5806752 5806913 -1
CDS:B0414.8a 5806965 5807139 -1
CDS:B0414.8a 5807183 5807241 -1

1 Sequence

Length
2103

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0414.8a.1 B0414.8a.1 2284   I: 5803956-5807291