WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34G6.7a.2 Sequence Name  C34G6.7a.2
Length (nt)  1601   Chromosome Location  I: 5902085-5904689
Chromosome . Primary Identifier  I Chromosome Location . Start  5902085
Chromosome Location . End  5904689 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34G6.7a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004109 stam-1 C34G6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34G6.7a C34G6.7a 1374   I: 5902262-5902447

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34G6.7a.2 5902085 5904689 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14405   363   I: 5902085-5902447 Caenorhabditis elegans
Exon14409   433   I: 5902545-5902977 Caenorhabditis elegans
Exon14411   251   I: 5903142-5903392 Caenorhabditis elegans
Exon14414   198   I: 5903446-5903643 Caenorhabditis elegans
Exon14417   192   I: 5903846-5904037 Caenorhabditis elegans
Exon14420   108   I: 5904220-5904327 Caenorhabditis elegans
Exon14422   56   I: 5904634-5904689 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34G6.7a.2 5902085 5904689 -1

1 Sequence

Length
1601

1 Sequence Ontology Term

Identifier Name Description
transcript