WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C34G6.7a Sequence Name  C34G6.7a
Length (nt)  1374   Chromosome Location  I: 5902262-5902447
Chromosome . Primary Identifier  I Chromosome Location . Start  5902262
Chromosome Location . End  5902447
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34G6.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29700 STAM-1, isoform a 50.8 457 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00041933
WBRNAi00003086
WBRNAi00029554
WBRNAi00116859
WBRNAi00060692
WBRNAi00060694
WBRNAi00060695
WBRNAi00060693
WBRNAi00083404
WBRNAi00083427
WBRNAi00083433
WBRNAi00083387
WBRNAi00083438
WBRNAi00083442

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C34G6.7a 5902262 5902447 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004109 stam-1 C34G6.7 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C34G6.7a 5902262 5902447 -1
CDS:C34G6.7a 5902545 5902977 -1
CDS:C34G6.7a 5903142 5903392 -1
CDS:C34G6.7a 5903446 5903643 -1
CDS:C34G6.7a 5903846 5904037 -1
CDS:C34G6.7a 5904220 5904327 -1
CDS:C34G6.7a 5904634 5904639 -1

1 Sequence

Length
1374

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C34G6.7a.2 C34G6.7a.2 1601   I: 5902085-5904689
Transcript:C34G6.7a.1 C34G6.7a.1 1587   I: 5902105-5904695