WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0207.12c.1 Sequence Name  B0207.12c.1
Length (nt)  2279   Chromosome Location  I: 5967251-5973326
Chromosome . Primary Identifier  I Chromosome Location . Start  5967251
Chromosome Location . End  5973326 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0207.12c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000232 avr-14 B0207.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0207.12c B0207.12c 720   I: 5970295-5970443

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0207.12c.1 5967251 5973326 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14574   205   I: 5967251-5967455 Caenorhabditis elegans
Exon14578   95   I: 5967505-5967599 Caenorhabditis elegans
Exon14583   113   I: 5967839-5967951 Caenorhabditis elegans
Exon14587   102   I: 5968132-5968233 Caenorhabditis elegans
Exon14592   105   I: 5968600-5968704 Caenorhabditis elegans
Exon14598   76   I: 5968811-5968886 Caenorhabditis elegans
Exon14603   198   I: 5968955-5969152 Caenorhabditis elegans
Exon14607   31   I: 5969202-5969232 Caenorhabditis elegans
Exon14612   135   I: 5969440-5969574 Caenorhabditis elegans
Exon14616   114   I: 5969619-5969732 Caenorhabditis elegans
Exon14620   77   I: 5969838-5969914 Caenorhabditis elegans
Exon14624   451   I: 5969993-5970443 Caenorhabditis elegans
Exon14636   83   I: 5970766-5970848 Caenorhabditis elegans
Exon14641   81   I: 5970902-5970982 Caenorhabditis elegans
Exon14646   89   I: 5971370-5971458 Caenorhabditis elegans
Exon14651   161   I: 5972583-5972743 Caenorhabditis elegans
Exon14656   163   I: 5973164-5973326 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0207.12c.1 5967251 5973326 -1

1 Sequence

Length
2279

1 Sequence Ontology Term

Identifier Name Description
transcript