WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0207.12c Sequence Name  B0207.12c
Length (nt)  720   Chromosome Location  I: 5970295-5970443
Chromosome . Primary Identifier  I Chromosome Location . Start  5970295
Chromosome Location . End  5970443
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0207.12c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32092 AVR-14, isoform c 28.2 239 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00002839
WBRNAi00027768

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0207.12c 5970295 5970443 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000232 avr-14 B0207.12 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0207.12c 5970295 5970443 -1
CDS:B0207.12c 5970766 5970848 -1
CDS:B0207.12c 5970902 5970982 -1
CDS:B0207.12c 5971370 5971458 -1
CDS:B0207.12c 5972583 5972743 -1
CDS:B0207.12c 5973164 5973320 -1

1 Sequence

Length
720

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0207.12c.1 B0207.12c.1 2279   I: 5967251-5973326