WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C27A12.9 Sequence Name  C27A12.9
Length (nt)  2652   Chromosome Location  I: 6061876-6062130
Chromosome . Primary Identifier  I Chromosome Location . Start  6061876
Chromosome Location . End  6062130
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A12.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36272 PIGO-1 98.9 883 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00041300
WBRNAi00003030
WBRNAi00029248
WBRNAi00111249
WBRNAi00117039
WBRNAi00111264
WBRNAi00081093
WBRNAi00111259
WBRNAi00115306

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C27A12.9 6061876 6062130 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016159 pigo-1 C27A12.9 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:C27A12.9 6061876 6062130 -1
CDS:C27A12.9 6062175 6062395 -1
CDS:C27A12.9 6062443 6062567 -1
CDS:C27A12.9 6062630 6062792 -1
CDS:C27A12.9 6062834 6062962 -1
CDS:C27A12.9 6063273 6063466 -1
CDS:C27A12.9 6063516 6063639 -1
CDS:C27A12.9 6065288 6065390 -1
CDS:C27A12.9 6065442 6065549 -1
CDS:C27A12.9 6065609 6065726 -1
CDS:C27A12.9 6065791 6065880 -1
CDS:C27A12.9 6065995 6066296 -1
CDS:C27A12.9 6066341 6066465 -1
CDS:C27A12.9 6066807 6066898 -1
CDS:C27A12.9 6067268 6067407 -1
CDS:C27A12.9 6067495 6067581 -1
CDS:C27A12.9 6067627 6067731 -1
CDS:C27A12.9 6067862 6068032 -1

1 Sequence

Length
2652

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C27A12.9.1 C27A12.9.1 2804   I: 6061732-6068040