WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK484.2a.1 Sequence Name  ZK484.2a.1
Length (nt)  2577   Chromosome Location  I: 6081812-6085957
Chromosome . Primary Identifier  I Chromosome Location . Start  6081812
Chromosome Location . End  6085957 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK484.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001819 haf-9 ZK484.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK484.2a ZK484.2a 2448   I: 6081816-6081920

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK484.2a.1 6081812 6085957 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon14955   109   I: 6081812-6081920 Caenorhabditis elegans
Exon14957   78   I: 6081964-6082041 Caenorhabditis elegans
Exon14960   95   I: 6082088-6082182 Caenorhabditis elegans
Exon14963   374   I: 6082328-6082701 Caenorhabditis elegans
Exon14968   118   I: 6082988-6083105 Caenorhabditis elegans
Exon14971   131   I: 6083148-6083278 Caenorhabditis elegans
Exon14974   79   I: 6083346-6083424 Caenorhabditis elegans
Exon14977   127   I: 6083467-6083593 Caenorhabditis elegans
Exon14980   116   I: 6083790-6083905 Caenorhabditis elegans
Exon14983   82   I: 6083956-6084037 Caenorhabditis elegans
Exon14986   129   I: 6084087-6084215 Caenorhabditis elegans
Exon14989   332   I: 6084262-6084593 Caenorhabditis elegans
Exon14992   224   I: 6084765-6084988 Caenorhabditis elegans
Exon14995   107   I: 6085040-6085146 Caenorhabditis elegans
Exon14997   105   I: 6085191-6085295 Caenorhabditis elegans
Exon14999   371   I: 6085587-6085957 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK484.2a.1 6081812 6085957 1

1 Sequence

Length
2577

1 Sequence Ontology Term

Identifier Name Description
transcript