WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C48E7.5 Sequence Name  C48E7.5
Length (nt)  1461   Chromosome Location  I: 6250571-6250647
Chromosome . Primary Identifier  I Chromosome Location . Start  6250571
Chromosome Location . End  6250647
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48E7.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36279 COF-2 55.3 486 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00042737
WBRNAi00042743
WBRNAi00042744
WBRNAi00003196
WBRNAi00003197
WBRNAi00029947

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C48E7.5 6250571 6250647 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000583 cof-2 C48E7.5 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:C48E7.5 6250571 6250647 1
CDS:C48E7.5 6250707 6251103 1
CDS:C48E7.5 6251260 6251352 1
CDS:C48E7.5 6251395 6251518 1
CDS:C48E7.5 6251563 6251660 1
CDS:C48E7.5 6251919 6252016 1
CDS:C48E7.5 6252073 6252232 1
CDS:C48E7.5 6252275 6252379 1
CDS:C48E7.5 6252428 6252529 1
CDS:C48E7.5 6252594 6252800 1

1 Sequence

Length
1461

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C48E7.5.1 C48E7.5.1 1633   I: 6250475-6252876