WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F57B10.4c Sequence Name  F57B10.4c
Length (nt)  2079   Chromosome Location  I: 6566173-6566231
Chromosome . Primary Identifier  I Chromosome Location . Start  6566173
Chromosome Location . End  6566231
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B10.4c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54258 SYP-6, isoform c 77.7 692 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00000323
WBRNAi00048820
WBRNAi00003839
WBRNAi00007837
WBRNAi00033009
WBRNAi00082379

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F57B10.4c 6566173 6566231 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019002 syp-6 F57B10.4 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F57B10.4c 6566173 6566231 1
CDS:F57B10.4c 6566277 6566350 1
CDS:F57B10.4c 6566397 6566522 1
CDS:F57B10.4c 6566570 6566958 1
CDS:F57B10.4c 6567002 6567487 1
CDS:F57B10.4c 6567532 6567676 1
CDS:F57B10.4c 6567832 6568188 1
CDS:F57B10.4c 6568232 6568534 1
CDS:F57B10.4c 6568580 6568659 1
CDS:F57B10.4c 6568707 6568766 1

1 Sequence

Length
2079

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F57B10.4c.1 F57B10.4c.1 2315   I: 6566125-6568954