WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02F2.1b.1 Sequence Name  K02F2.1b.1
Length (nt)  3024   Chromosome Location  I: 6838354-6843340
Chromosome . Primary Identifier  I Chromosome Location . Start  6838354
Chromosome Location . End  6843340 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02F2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001056 dpf-3 K02F2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02F2.1b K02F2.1b 2784   I: 6838354-6838527

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02F2.1b.1 6838354 6843340 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17299   174   I: 6838354-6838527 Caenorhabditis elegans
Exon17302   71   I: 6838574-6838644 Caenorhabditis elegans
Exon17304   147   I: 6838814-6838960 Caenorhabditis elegans
Exon17306   129   I: 6839016-6839144 Caenorhabditis elegans
Exon17308   292   I: 6839215-6839506 Caenorhabditis elegans
Exon17310   140   I: 6839555-6839694 Caenorhabditis elegans
Exon17312   246   I: 6839803-6840048 Caenorhabditis elegans
Exon17314   110   I: 6840117-6840226 Caenorhabditis elegans
Exon17316   70   I: 6840280-6840349 Caenorhabditis elegans
Exon17318   67   I: 6840395-6840461 Caenorhabditis elegans
Exon17320   125   I: 6840506-6840630 Caenorhabditis elegans
Exon17322   141   I: 6840692-6840832 Caenorhabditis elegans
Exon17324   214   I: 6841167-6841380 Caenorhabditis elegans
Exon17326   74   I: 6841429-6841502 Caenorhabditis elegans
Exon17328   126   I: 6841965-6842090 Caenorhabditis elegans
Exon17330   112   I: 6842141-6842252 Caenorhabditis elegans
Exon17332   147   I: 6842298-6842444 Caenorhabditis elegans
Exon17334   149   I: 6842499-6842647 Caenorhabditis elegans
Exon17336   112   I: 6842697-6842808 Caenorhabditis elegans
Exon17337   378   I: 6842963-6843340 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02F2.1b.1 6838354 6843340 1

1 Sequence

Length
3024

1 Sequence Ontology Term

Identifier Name Description
transcript