WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K02F2.1b Sequence Name  K02F2.1b
Length (nt)  2784   Chromosome Location  I: 6838354-6838527
Chromosome . Primary Identifier  I Chromosome Location . Start  6838354
Chromosome Location . End  6838527
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02F2.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28837 DPF-3, isoform b 105.3 927 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00049733
WBRNAi00003898
WBRNAi00033886
WBRNAi00062300
WBRNAi00089105
WBRNAi00116484

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K02F2.1b 6838354 6838527 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001056 dpf-3 K02F2.1 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:K02F2.1b 6838354 6838527 1
CDS:K02F2.1b 6838574 6838644 1
CDS:K02F2.1b 6838814 6838960 1
CDS:K02F2.1b 6839016 6839144 1
CDS:K02F2.1b 6839215 6839506 1
CDS:K02F2.1b 6839555 6839694 1
CDS:K02F2.1b 6839803 6840048 1
CDS:K02F2.1b 6840117 6840226 1
CDS:K02F2.1b 6840280 6840349 1
CDS:K02F2.1b 6840395 6840461 1
CDS:K02F2.1b 6840506 6840630 1
CDS:K02F2.1b 6840692 6840832 1
CDS:K02F2.1b 6841167 6841380 1
CDS:K02F2.1b 6841429 6841502 1
CDS:K02F2.1b 6841965 6842090 1
CDS:K02F2.1b 6842141 6842252 1
CDS:K02F2.1b 6842298 6842444 1
CDS:K02F2.1b 6842499 6842647 1
CDS:K02F2.1b 6842697 6842808 1
CDS:K02F2.1b 6842963 6843100 1

1 Sequence

Length
2784

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K02F2.1b.1 K02F2.1b.1 3024   I: 6838354-6843340