WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10B11.7a.1 Sequence Name  T10B11.7a.1
Length (nt)  2265   Chromosome Location  I: 6945598-6950499
Chromosome . Primary Identifier  I Chromosome Location . Start  6945598
Chromosome Location . End  6950499 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10B11.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020403 hrde-4 T10B11.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10B11.7a T10B11.7a 1638   I: 6946349-6946360

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10B11.7a.1 6945598 6950499 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17656   560   I: 6945598-6946157 Caenorhabditis elegans
Exon17657   38   I: 6946323-6946360 Caenorhabditis elegans
Exon17659   173   I: 6946524-6946696 Caenorhabditis elegans
Exon17661   306   I: 6946755-6947060 Caenorhabditis elegans
Exon17663   292   I: 6947178-6947469 Caenorhabditis elegans
Exon17665   120   I: 6947517-6947636 Caenorhabditis elegans
Exon17667   302   I: 6947686-6947987 Caenorhabditis elegans
Exon17669   108   I: 6948298-6948405 Caenorhabditis elegans
Exon17671   160   I: 6949860-6950019 Caenorhabditis elegans
Exon17674   81   I: 6950068-6950148 Caenorhabditis elegans
Exon17675   125   I: 6950375-6950499 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10B11.7a.1 6945598 6950499 -1

1 Sequence

Length
2265

1 Sequence Ontology Term

Identifier Name Description
transcript