WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T10B11.7a Sequence Name  T10B11.7a
Length (nt)  1638   Chromosome Location  I: 6946349-6946360
Chromosome . Primary Identifier  I Chromosome Location . Start  6946349
Chromosome Location . End  6946360
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10B11.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43751 HRDE-4, isoform a 62.7 545 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00053000
WBRNAi00004200
WBRNAi00035413

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T10B11.7a 6946349 6946360 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020403 hrde-4 T10B11.7 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:T10B11.7a 6946349 6946360 -1
CDS:T10B11.7a 6946524 6946696 -1
CDS:T10B11.7a 6946755 6947060 -1
CDS:T10B11.7a 6947178 6947469 -1
CDS:T10B11.7a 6947517 6947636 -1
CDS:T10B11.7a 6947686 6947987 -1
CDS:T10B11.7a 6948298 6948405 -1
CDS:T10B11.7a 6949860 6950019 -1
CDS:T10B11.7a 6950068 6950148 -1
CDS:T10B11.7a 6950375 6950458 -1

1 Sequence

Length
1638

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T10B11.7a.1 T10B11.7a.1 2265   I: 6945598-6950499