WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30F12.1.1 Sequence Name  C30F12.1.1
Length (nt)  2164   Chromosome Location  I: 6954414-6961139
Chromosome . Primary Identifier  I Chromosome Location . Start  6954414
Chromosome Location . End  6961139 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30F12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016260 rege-1 C30F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30F12.1 C30F12.1 1905   I: 6954673-6954838

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30F12.1.1 6954414 6961139 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17697   425   I: 6954414-6954838 Caenorhabditis elegans
Exon17698   184   I: 6954938-6955121 Caenorhabditis elegans
Exon17699   246   I: 6955685-6955930 Caenorhabditis elegans
Exon17700   227   I: 6956472-6956698 Caenorhabditis elegans
Exon17701   177   I: 6957567-6957743 Caenorhabditis elegans
Exon17702   87   I: 6958177-6958263 Caenorhabditis elegans
Exon17703   105   I: 6958428-6958532 Caenorhabditis elegans
Exon17704   272   I: 6959374-6959645 Caenorhabditis elegans
Exon17705   125   I: 6959859-6959983 Caenorhabditis elegans
Exon17706   65   I: 6960076-6960140 Caenorhabditis elegans
Exon17707   251   I: 6960889-6961139 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30F12.1.1 6954414 6961139 -1

1 Sequence

Length
2164

1 Sequence Ontology Term

Identifier Name Description
transcript