WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13G3.5a.1 Sequence Name  F13G3.5a.1
Length (nt)  1030   Chromosome Location  I: 7300999-7302975
Chromosome . Primary Identifier  I Chromosome Location . Start  7300999
Chromosome Location . End  7302975 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13G3.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008765 ttx-7 F13G3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13G3.5a F13G3.5a 858   I: 7301165-7301426

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13G3.5a.1 7300999 7302975 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18586   428   I: 7300999-7301426 Caenorhabditis elegans
Exon18590   121   I: 7301907-7302027 Caenorhabditis elegans
Exon18592   155   I: 7302072-7302226 Caenorhabditis elegans
Exon18595   105   I: 7302335-7302439 Caenorhabditis elegans
Exon18598   137   I: 7302553-7302689 Caenorhabditis elegans
Exon18602   84   I: 7302892-7302975 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13G3.5a.1 7300999 7302975 -1

1 Sequence

Length
1030

1 Sequence Ontology Term

Identifier Name Description
transcript