WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F13G3.5a Sequence Name  F13G3.5a
Length (nt)  858   Chromosome Location  I: 7301165-7301426
Chromosome . Primary Identifier  I Chromosome Location . Start  7301165
Chromosome Location . End  7301426
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13G3.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47972 TTX-7, isoform a 31.0 285 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00044539
WBRNAi00003372
WBRNAi00030906
WBRNAi00116918
WBRNAi00117949

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F13G3.5a 7301165 7301426 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008765 ttx-7 F13G3.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F13G3.5a 7301165 7301426 -1
CDS:F13G3.5a 7301907 7302027 -1
CDS:F13G3.5a 7302072 7302226 -1
CDS:F13G3.5a 7302335 7302439 -1
CDS:F13G3.5a 7302553 7302689 -1
CDS:F13G3.5a 7302892 7302969 -1

1 Sequence

Length
858

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F13G3.5a.1 F13G3.5a.1 1030   I: 7300999-7302975
Transcript:F13G3.5a.2 F13G3.5a.2 1016   I: 7301007-7302969