WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F07A5.3 Sequence Name  F07A5.3
Length (nt)  1773   Chromosome Location  I: 7354494-7354619
Chromosome . Primary Identifier  I Chromosome Location . Start  7354494
Chromosome Location . End  7354619
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07A5.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05556 SCAV-6 67.1 590 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00043849
WBRNAi00003329
WBRNAi00078838

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F07A5.3 7354494 7354619 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008542 scav-6 F07A5.3 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F07A5.3 7354494 7354619 1
CDS:F07A5.3 7354668 7354843 1
CDS:F07A5.3 7354894 7355044 1
CDS:F07A5.3 7355112 7355212 1
CDS:F07A5.3 7355258 7355327 1
CDS:F07A5.3 7355373 7355468 1
CDS:F07A5.3 7355538 7355685 1
CDS:F07A5.3 7355780 7355909 1
CDS:F07A5.3 7355955 7356065 1
CDS:F07A5.3 7356367 7356643 1
CDS:F07A5.3 7356695 7356768 1
CDS:F07A5.3 7356815 7357127 1

1 Sequence

Length
1773

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F07A5.3.1 F07A5.3.1 1862   I: 7354491-7357213