WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26A3.8b.1 Sequence Name  F26A3.8b.1
Length (nt)  4563   Chromosome Location  I: 7643640-7649430
Chromosome . Primary Identifier  I Chromosome Location . Start  7643640
Chromosome Location . End  7649430 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26A3.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004508 rrf-1 F26A3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26A3.8b F26A3.8b 4563   I: 7643640-7643800

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26A3.8b.1 7643640 7649430 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19720   161   I: 7643640-7643800 Caenorhabditis elegans
Exon19722   120   I: 7643848-7643967 Caenorhabditis elegans
Exon19726   250   I: 7644018-7644267 Caenorhabditis elegans
Exon19728   527   I: 7644572-7645098 Caenorhabditis elegans
Exon19730   136   I: 7645151-7645286 Caenorhabditis elegans
Exon19732   180   I: 7645339-7645518 Caenorhabditis elegans
Exon19734   272   I: 7645564-7645835 Caenorhabditis elegans
Exon19736   202   I: 7645881-7646082 Caenorhabditis elegans
Exon19738   458   I: 7646138-7646595 Caenorhabditis elegans
Exon19740   112   I: 7646643-7646754 Caenorhabditis elegans
Exon19742   363   I: 7646805-7647167 Caenorhabditis elegans
Exon19744   180   I: 7647212-7647391 Caenorhabditis elegans
Exon19746   543   I: 7647469-7648011 Caenorhabditis elegans
Exon19748   267   I: 7648060-7648326 Caenorhabditis elegans
Exon19750   180   I: 7648388-7648567 Caenorhabditis elegans
Exon19752   144   I: 7648646-7648789 Caenorhabditis elegans
Exon19754   123   I: 7648838-7648960 Caenorhabditis elegans
Exon19756   321   I: 7649036-7649356 Caenorhabditis elegans
Exon19757   24   I: 7649407-7649430 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26A3.8b.1 7643640 7649430 -1

1 Sequence

Length
4563

1 Sequence Ontology Term

Identifier Name Description
transcript