WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F26A3.8b Sequence Name  F26A3.8b
Length (nt)  4563   Chromosome Location  I: 7643640-7643800
Chromosome . Primary Identifier  I Chromosome Location . Start  7643640
Chromosome Location . End  7643800
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26A3.8b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46152 RRF-1, isoform b 177.2 1520 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00081764
WBRNAi00002402
WBRNAi00045595

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F26A3.8b 7643640 7643800 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004508 rrf-1 F26A3.8 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:F26A3.8b 7643640 7643800 -1
CDS:F26A3.8b 7643848 7643967 -1
CDS:F26A3.8b 7644018 7644267 -1
CDS:F26A3.8b 7644572 7645098 -1
CDS:F26A3.8b 7645151 7645286 -1
CDS:F26A3.8b 7645339 7645518 -1
CDS:F26A3.8b 7645564 7645835 -1
CDS:F26A3.8b 7645881 7646082 -1
CDS:F26A3.8b 7646138 7646595 -1
CDS:F26A3.8b 7646643 7646754 -1
CDS:F26A3.8b 7646805 7647167 -1
CDS:F26A3.8b 7647212 7647391 -1
CDS:F26A3.8b 7647469 7648011 -1
CDS:F26A3.8b 7648060 7648326 -1
CDS:F26A3.8b 7648388 7648567 -1
CDS:F26A3.8b 7648646 7648789 -1
CDS:F26A3.8b 7648838 7648960 -1
CDS:F26A3.8b 7649036 7649356 -1
CDS:F26A3.8b 7649407 7649430 -1

1 Sequence

Length
4563

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F26A3.8b.1 F26A3.8b.1 4563   I: 7643640-7649430