WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27D4.6a.2 Sequence Name  F27D4.6a.2
Length (nt)  3713   Chromosome Location  I: 7731121-7737973
Chromosome . Primary Identifier  I Chromosome Location . Start  7731121
Chromosome Location . End  7737973 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27D4.6a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009190 F27D4.6 F27D4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27D4.6a F27D4.6a 3027   I: 7731190-7731227

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27D4.6a.2 7731121 7737973 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon19967   107   I: 7731121-7731227 Caenorhabditis elegans
Exon19971   107   I: 7732073-7732179 Caenorhabditis elegans
Exon19975   159   I: 7732226-7732384 Caenorhabditis elegans
Exon19979   170   I: 7732431-7732600 Caenorhabditis elegans
Exon19983   187   I: 7732860-7733046 Caenorhabditis elegans
Exon19987   54   I: 7733121-7733174 Caenorhabditis elegans
Exon19991   197   I: 7733290-7733486 Caenorhabditis elegans
Exon19995   232   I: 7733705-7733936 Caenorhabditis elegans
Exon19999   83   I: 7733986-7734068 Caenorhabditis elegans
Exon20003   111   I: 7734121-7734231 Caenorhabditis elegans
Exon20007   332   I: 7734282-7734613 Caenorhabditis elegans
Exon20011   47   I: 7734660-7734706 Caenorhabditis elegans
Exon20015   80   I: 7734755-7734834 Caenorhabditis elegans
Exon20019   111   I: 7734880-7734990 Caenorhabditis elegans
Exon20023   139   I: 7735035-7735173 Caenorhabditis elegans
Exon20027   57   I: 7735221-7735277 Caenorhabditis elegans
Exon20031   80   I: 7735487-7735566 Caenorhabditis elegans
Exon20035   108   I: 7735611-7735718 Caenorhabditis elegans
Exon20039   73   I: 7735763-7735835 Caenorhabditis elegans
Exon20043   27   I: 7735884-7735910 Caenorhabditis elegans
Exon20047   60   I: 7735960-7736019 Caenorhabditis elegans
Exon20051   33   I: 7736255-7736287 Caenorhabditis elegans
Exon20055   233   I: 7736336-7736568 Caenorhabditis elegans
Exon20059   127   I: 7736616-7736742 Caenorhabditis elegans
Exon20063   146   I: 7736799-7736944 Caenorhabditis elegans
Exon20067   100   I: 7737001-7737100 Caenorhabditis elegans
Exon20071   56   I: 7737152-7737207 Caenorhabditis elegans
Exon20073   148   I: 7737255-7737402 Caenorhabditis elegans
Exon20077   110   I: 7737488-7737597 Caenorhabditis elegans
Exon20081   87   I: 7737645-7737731 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27D4.6a.2 7731121 7737973 1

1 Sequence

Length
3713

1 Sequence Ontology Term

Identifier Name Description
transcript