WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F27D4.6a Sequence Name  F27D4.6a
Length (nt)  3027   Chromosome Location  I: 7731190-7731227
Chromosome . Primary Identifier  I Chromosome Location . Start  7731190
Chromosome Location . End  7731227
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27D4.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32394 F27D4.6, isoform a 116.1 1008 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00045742
WBRNAi00003505
WBRNAi00031498
WBRNAi00117457

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F27D4.6a 7731190 7731227 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009190 F27D4.6 F27D4.6 Caenorhabditis elegans

26 Locations


Feature . Primary Identifier
Start End Strand
CDS:F27D4.6a 7731190 7731227 1
CDS:F27D4.6a 7732073 7732179 1
CDS:F27D4.6a 7732226 7732384 1
CDS:F27D4.6a 7732431 7732600 1
CDS:F27D4.6a 7732860 7733046 1
CDS:F27D4.6a 7733121 7733174 1
CDS:F27D4.6a 7733290 7733486 1
CDS:F27D4.6a 7733705 7733936 1
CDS:F27D4.6a 7733986 7734068 1
CDS:F27D4.6a 7734121 7734231 1
CDS:F27D4.6a 7734282 7734613 1
CDS:F27D4.6a 7734660 7734706 1
CDS:F27D4.6a 7734755 7734834 1
CDS:F27D4.6a 7734880 7734990 1
CDS:F27D4.6a 7735035 7735173 1
CDS:F27D4.6a 7735221 7735277 1
CDS:F27D4.6a 7735487 7735566 1
CDS:F27D4.6a 7735611 7735718 1
CDS:F27D4.6a 7735763 7735835 1
CDS:F27D4.6a 7735884 7735910 1
CDS:F27D4.6a 7735960 7736019 1
CDS:F27D4.6a 7736255 7736287 1
CDS:F27D4.6a 7736336 7736568 1
CDS:F27D4.6a 7736616 7736742 1
CDS:F27D4.6a 7736799 7736944 1
CDS:F27D4.6a 7737001 7737036 1

1 Sequence

Length
3027

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F27D4.6a.1 F27D4.6a.1 3712   I: 7731121-7737995
Transcript:F27D4.6a.3 F27D4.6a.3 3752   I: 7731121-7737961
Transcript:F27D4.6a.2 F27D4.6a.2 3713   I: 7731121-7737973