WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R11A5.4b Sequence Name  R11A5.4b
Length (nt)  1890   Chromosome Location  I: 7869901-7871132
Chromosome . Primary Identifier  I Chromosome Location . Start  7869901
Chromosome Location . End  7871132
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11A5.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53966 PCK-2, isoform b 70.7 629 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00001222
WBRNAi00051759
WBRNAi00004079
WBRNAi00034849
WBRNAi00116976
WBRNAi00090555

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R11A5.4b 7869901 7871132 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011232 pck-2 R11A5.4 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:R11A5.4b 7869901 7871132 1
CDS:R11A5.4b 7871178 7871484 1
CDS:R11A5.4b 7871533 7871883 1

1 Sequence

Length
1890

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R11A5.4b.1 R11A5.4b.1 2889   I: 7869096-7872077