WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20G4.3.1 Sequence Name  F20G4.3.1
Length (nt)  6494   Chromosome Location  I: 7926623-7934577
Chromosome . Primary Identifier  I Chromosome Location . Start  7926623
Chromosome Location . End  7934577 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20G4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003777 nmy-2 F20G4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20G4.3 F20G4.3 6012   I: 7927071-7927198

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20G4.3.1 7926623 7934577 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon20525   576   I: 7926623-7927198 Caenorhabditis elegans
Exon20526   447   I: 7927246-7927692 Caenorhabditis elegans
Exon20527   865   I: 7927739-7928603 Caenorhabditis elegans
Exon20528   690   I: 7928651-7929340 Caenorhabditis elegans
Exon20529   189   I: 7929392-7929580 Caenorhabditis elegans
Exon20530   123   I: 7929903-7930025 Caenorhabditis elegans
Exon20531   247   I: 7930073-7930319 Caenorhabditis elegans
Exon20532   159   I: 7930362-7930520 Caenorhabditis elegans
Exon20533   146   I: 7930693-7930838 Caenorhabditis elegans
Exon20534   2096   I: 7930886-7932981 Caenorhabditis elegans
Exon20535   163   I: 7933027-7933189 Caenorhabditis elegans
Exon20536   226   I: 7933237-7933462 Caenorhabditis elegans
Exon20537   185   I: 7933514-7933698 Caenorhabditis elegans
Exon20538   303   I: 7934145-7934447 Caenorhabditis elegans
Exon20539   79   I: 7934499-7934577 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20G4.3.1 7926623 7934577 -1

1 Sequence

Length
6494

1 Sequence Ontology Term

Identifier Name Description
transcript