WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09H6.2b.1 Sequence Name  C09H6.2b.1
Length (nt)  3257   Chromosome Location  I: 8109746-8119316
Chromosome . Primary Identifier  I Chromosome Location . Start  8109746
Chromosome Location . End  8119316 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09H6.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002999 lin-10 C09H6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09H6.2b C09H6.2b 2865   I: 8110135-8110240

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09H6.2b.1 8109746 8119316 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21046   495   I: 8109746-8110240 Caenorhabditis elegans
Exon21050   88   I: 8110321-8110408 Caenorhabditis elegans
Exon21053   424   I: 8110910-8111333 Caenorhabditis elegans
Exon21056   178   I: 8111699-8111876 Caenorhabditis elegans
Exon21059   146   I: 8111960-8112105 Caenorhabditis elegans
Exon21062   230   I: 8112165-8112394 Caenorhabditis elegans
Exon21065   175   I: 8113719-8113893 Caenorhabditis elegans
Exon21068   446   I: 8114364-8114809 Caenorhabditis elegans
Exon21071   88   I: 8114910-8114997 Caenorhabditis elegans
Exon21074   228   I: 8115081-8115308 Caenorhabditis elegans
Exon21079   224   I: 8116643-8116866 Caenorhabditis elegans
Exon21082   52   I: 8117330-8117381 Caenorhabditis elegans
Exon21085   90   I: 8117590-8117679 Caenorhabditis elegans
Exon21089   239   I: 8118279-8118517 Caenorhabditis elegans
Exon21091   154   I: 8119163-8119316 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09H6.2b.1 8109746 8119316 -1

1 Sequence

Length
3257

1 Sequence Ontology Term

Identifier Name Description
transcript