WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09H6.2a.1 Sequence Name  C09H6.2a.1
Length (nt)  3339   Chromosome Location  I: 8109746-8119314
Chromosome . Primary Identifier  I Chromosome Location . Start  8109746
Chromosome Location . End  8119314 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09H6.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002999 lin-10 C09H6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09H6.2a C09H6.2a 2949   I: 8110135-8110240

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09H6.2a.1 8109746 8119314 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21047   495   I: 8109746-8110240 Caenorhabditis elegans
Exon21049   88   I: 8110321-8110408 Caenorhabditis elegans
Exon21052   424   I: 8110910-8111333 Caenorhabditis elegans
Exon21055   178   I: 8111699-8111876 Caenorhabditis elegans
Exon21058   146   I: 8111960-8112105 Caenorhabditis elegans
Exon21061   230   I: 8112165-8112394 Caenorhabditis elegans
Exon21064   175   I: 8113719-8113893 Caenorhabditis elegans
Exon21067   446   I: 8114364-8114809 Caenorhabditis elegans
Exon21070   88   I: 8114910-8114997 Caenorhabditis elegans
Exon21073   228   I: 8115081-8115308 Caenorhabditis elegans
Exon21076   84   I: 8115784-8115867 Caenorhabditis elegans
Exon21078   224   I: 8116643-8116866 Caenorhabditis elegans
Exon21081   52   I: 8117330-8117381 Caenorhabditis elegans
Exon21084   90   I: 8117590-8117679 Caenorhabditis elegans
Exon21088   239   I: 8118279-8118517 Caenorhabditis elegans
Exon21090   152   I: 8119163-8119314 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09H6.2a.1 8109746 8119314 -1

1 Sequence

Length
3339

1 Sequence Ontology Term

Identifier Name Description
transcript