WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09H6.2c.1 Sequence Name  C09H6.2c.1
Length (nt)  2796   Chromosome Location  I: 8110135-8118515
Chromosome . Primary Identifier  I Chromosome Location . Start  8110135
Chromosome Location . End  8118515 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09H6.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002999 lin-10 C09H6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09H6.2c C09H6.2c 2796   I: 8110135-8110240

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09H6.2c.1 8110135 8118515 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21048   106   I: 8110135-8110240 Caenorhabditis elegans
Exon21051   88   I: 8110321-8110408 Caenorhabditis elegans
Exon21054   424   I: 8110910-8111333 Caenorhabditis elegans
Exon21057   178   I: 8111699-8111876 Caenorhabditis elegans
Exon21060   146   I: 8111960-8112105 Caenorhabditis elegans
Exon21063   230   I: 8112165-8112394 Caenorhabditis elegans
Exon21066   175   I: 8113719-8113893 Caenorhabditis elegans
Exon21069   446   I: 8114364-8114809 Caenorhabditis elegans
Exon21072   88   I: 8114910-8114997 Caenorhabditis elegans
Exon21075   228   I: 8115081-8115308 Caenorhabditis elegans
Exon21077   84   I: 8115784-8115867 Caenorhabditis elegans
Exon21080   224   I: 8116643-8116866 Caenorhabditis elegans
Exon21083   52   I: 8117330-8117381 Caenorhabditis elegans
Exon21086   90   I: 8117590-8117679 Caenorhabditis elegans
Exon21087   237   I: 8118279-8118515 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09H6.2c.1 8110135 8118515 -1

1 Sequence

Length
2796

1 Sequence Ontology Term

Identifier Name Description
transcript