WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28B8.5.1 Sequence Name  T28B8.5.1
Length (nt)  1621   Chromosome Location  I: 8139468-8142537
Chromosome . Primary Identifier  I Chromosome Location . Start  8139468
Chromosome Location . End  8142537 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28B8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012116 del-4 T28B8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28B8.5 T28B8.5 1584   I: 8139505-8139621

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28B8.5.1 8139468 8142537 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21106   154   I: 8139468-8139621 Caenorhabditis elegans
Exon21107   174   I: 8139668-8139841 Caenorhabditis elegans
Exon21108   150   I: 8139885-8140034 Caenorhabditis elegans
Exon21109   58   I: 8140082-8140139 Caenorhabditis elegans
Exon21110   82   I: 8140217-8140298 Caenorhabditis elegans
Exon21111   279   I: 8140370-8140648 Caenorhabditis elegans
Exon21112   200   I: 8140696-8140895 Caenorhabditis elegans
Exon21113   77   I: 8141359-8141435 Caenorhabditis elegans
Exon21114   132   I: 8141701-8141832 Caenorhabditis elegans
Exon21115   102   I: 8141976-8142077 Caenorhabditis elegans
Exon21116   106   I: 8142282-8142387 Caenorhabditis elegans
Exon21117   107   I: 8142431-8142537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28B8.5.1 8139468 8142537 -1

1 Sequence

Length
1621

1 Sequence Ontology Term

Identifier Name Description
transcript